Publications-bk

Open Access

All ATLAS publications are open access. Please find below the links to the scientific outcome of ATLAS.

Journal Articles

J15.

Guiqiu Liao,Oscar Caravaca-Mora,Benoit Rosa,Philippe Zanne,Diego Dall'Alba,Paolo Fiorini,Michel de Mathelin,Florent Nageotte, Michalina J. Gora

Distortion and Instability Compensation with Deep Learning for Rotational Scanning Endoscopic Optical Coherence Tomography

in Medical Image Analysis (2022), doi: https://doi.org/10.1016/j.media.2022.102355

J14.

Stefano Pane, Veronica Iacovacci, Mohammad Hasan Dad Ansari and Arianna Menciassi

Dynamic tracking of a magnetic micro-roller using ultrasound phase analysis

in Scientific Reports 11, 23239 (2021). https://doi.org/10.1038/s41598-021-02553-z.

J13.

Costanza Culmone, Semih Fatih Yikilmaz, Fabian Trauzettel and Paul Breedveld

Follow-The-Leader Mechanisms in Medical Devices: A Review on Scientific and Patent Literature

in IEEE Reviews in Biomedical Engineering, 2021, doi: 10.1109/RBME.2021.3113395.

Sahu, S. K., Sozer, C., Rosa, B., Tamadon, I., Renaud, P., & Menciassi, A. (2021). Shape Reconstruction Processes for Interventional Application Devices: State of the Art, Progress, and Future Directions. Frontiers in Robotics and AI, 8.

J11.

Sanat Ramesh, Diego Dall’Alba, Cristians Gonzalez, Tong Yu, Pietro Mascagni, Didier Mutter, Jacques Marescaux, Paolo Fiorini & Nicolas Padoy

Multi-task temporal convolutional networks for joint recognition of surgical phases and steps in gastric bypass procedures

in International Journal of Computer Assisted Radiology and Surgery, 16, pages1111–1119, May 2021

J10.

Beatriz Farola Barata, Phuong Toan Tran, Gianni Borghesan, Keir McCutcheon, Diego Dall’Alba, Paolo Fiorini, Jos Vander Sloten, and Emmanuel Vander Poorten

IVUS-Based Local Vessel Estimation for Robotic Intravascular Navigation

in IEEE Robotics and Automation Letters, vol. 6, no. 4, pp. 8102-8109, Oct. 2021, doi: 10.1109/LRA.2021.3102307.

J9.

Xuan Thao Ha, Mouloud Ourak, Omar Al-Ahmad, Di Wu, Gianni Borghesan, Arianna Menciassi, and Emmanuel Vander Poorten

Robust Catheter Tracking by Fusing Electromagnetic Tracking, Fiber Bragg Grating, and Sparse Fluoroscopic Image

in IEEE Sensors Journal, 2021

J8.

M. Ourak, S. De Buck, X. T. Ha, O. Al-Ahmad, K. Bamps. J. Ector and E. Vander Poorten

Fusion of Biplane Fluoroscopy With Fiber Bragg Grating for 3D Catheter Shape Reconstruction

in IEEE Robotics and Automation Letters, 2021

J7.

Jorge F. Lazo, Aldo Marzullo, Sara Moccia, Michele Catellani, Benoit Rosa, Michel de Mathelin and Elena De Momi

Using spatial-temporal ensembles of convolutional neural networks for lumen segmentation in ureteroscopy

in International Journal of Computer Assisted Radiology and Surgery, 2021

J6.

Zhen Li, Jenny Dankelman and Elena De Momi

Path planning for endovascular catheterization under curvature constraints via two-phase searching approach

in International Journal of Computer Assisted Radiology and Surgery, 2021

J5.

Di Wu, Yao Zhang, Mouloud Ourak, Kenan Niu, Jenny Dankelman, Emmanuel B Vander Poorten

Hysteresis Modeling of Robotic Catheters based on Long Short-Term Memory Network for Improved Environment Reconstruction

in IEEE Robotics and Automation Letters, vol. 6, no. 2, pp. 2106-2113, April 2021

J4.

Ajay Vikram Singh*, Mohammad Hasan Dad Ansari*, Mihir Mahajan, Shubhangi Srivastava, Shubham Kashyap, Prajjwal Dwivedi, Vaibhav Pandit, Uma Katha* - equal contribution

Sperm Cell Driven Microrobots—Emerging Opportunities and Challenges for Biologically Inspired Robotic Design

in Micromachines 2020, 11, 448

J3.

Luca Sestini, Benoit Rosa, Elena De Momi, Giancarlo Ferrigno, Nicolas Padoy

A Kinematic Bottleneck Approach For Pose Regression of Flexible Surgical Instruments directly from Images

in IEEE Robotics and Automation Letters, April 2021

J2.

Martina Finocchiaro, Pablo Cortegoso Valdivia, Albert Hernansanz, Nicola Marino, Denise Amram, Alicia Casals, Arianna Menciassi, Wojciech Marlicz, Gastone Ciuti, Anastasios Koulaouzidis

Training Simulators for Gastrointestinal Endoscopy: Current and Future Perspectives

in Cancers, vol. 13, no. 6, pp. 1427, March 2021

J1.

Guiqiu Liao, Oscar Caravaca-Mora, Benoit Rosa, Philippe Zanne, Alexandre Asch, Diego Dall’Alba, Paolo Fiorini, Michel de Mathelin, Florent Nageotte and Michalina J. Gora

Data Stream Stabilization for Optical Coherence Tomography Volumetric Scanning

in IEEE Transactions on Medical Robotics & Bionics, June 2021

Conference and Workshop Proceedings

C10.

Marcello Chiurazzi, Angelo Damone, Martina Finocchiaro, Francesca Farnesi, Giacomo Lo Secco, Edoardo Forcignano, Alberto Arezzo, Gastone Ciuti

Small bowel to closest human body surface distance calculation through a custom-made software using CT-based datasets

Annual International Conference IEEE Engineering in Medicine and Biology Society (EMBC 2021)

C9.

Zhen Li, Maria Elisabetta Mancini, Giovanni Monizzi, Daniele Andreini, Giancarlo Ferrigno, Jenny Dankelman and Elena De Momi

Model-to-Image Registration via Deep Learning towards Image-Guided Endovascular Interventions

IEEE 2021 International Symposium of Medical Robotics (ISMR 2021)

C8.

Ameya Pore, Davide Corsi, Enrico Marchesini, Diego Dall'Alba, Alicia Casals, Alessandro Farinelli, Paolo Fiorini

Safe Reinforcement Learning using Formal Verification for Tissue Retraction in Autonomous Robotic-Assisted Surgery

IEEE/RSJ 2021 International Conference on Intelligent Robots and Systems (IROS 2021)

C7.

Luca Marzari, Ameya Pore, Diego Dall'Alba, Gerardo Aragon-Camarasa, Alessandro Farinelli, Paolo Fiorini

Towards Hierarchical Task Decomposition using Deep Reinforcement Learning for Pick and Place Subtasks

IEEE International Conference on advanced robotics (ICAR 2021)

C6.

Ameya Pore, Eleonora Tagliabue, Marco Piccinelli, Diego Dall'Alba, Alicia Casals, Paolo Fiorini

Learning from Demonstrations for Autonomous Soft-tissue Retraction

IEEE/RAS 2021 International Symposium of Medical Robotics (ISMR 2021)

C5.

Martina Finocchiaro, Cristina Giosuè, Gaspare Drago, Fabio Cibella, Arianna Menciassi, Mario Sprovieri, Gastone Ciuti

Design of a magnetic actuation system for a microbiota-collection ingestible capsule

IEEE/RAS 2021 International Conference on Robotics and Automation (ICRA 2021)

C4.

Jorge F. Lazo, Sara Moccia, Emanuele Frontoni, and Elena De Momi

Comparison of different CNNs for breast tumor classification from ultrasound images

Proc. of the 7th Congress of the National Group of Bioengineering (GNB), 2020

C3.

Jorge F. Lazo, Aldo Marzullo, Sara Moccia, Michele Catellani, Benoit Rosa, Francesco Calimeri, Michel de Mathelin and Elena De Momi

A Lumen Segmentation Method in Ureteroscopy Images based on a Deep Residual U-Net
architecture

Proc. of the 25th International Conference on Pattern Recognition

C2.

Zhen Li, Alice Segato, Alberto Favaro, Jenny Dankelman and Elena De Momi

A Heuristic-Sliding-Window-based RRT Path Planning for Endovascular Catheterization

Proc. of the 7th Congress of the National Group of Bioengineering (GNB), 2020

C1.

Eleonora Tagliabue*, Ameya Pore*, Diego Dall'Alba, Enrico Magnabosco, Marco Piccinelli, Paolo Fiorini * - equal contribution

Soft Tissue Simulation Environment to Learn Manipulation Tasks in Autonomous Robotic Surgery

2020 IEEE/RSJ International Conference on Intelligent Robots and Systems (IROS 2020)

Abstracts & Extended Abstracts

A23.

Fernando Gonzalez Herrera, Ameya Pore, Luca Sestini, Sujit Kumar Sahu, Guiqiu Liao, Philippe Zanne, Diego Dall'alba, Albert Hernansanz, Benoit Rosa and Florent Nageotte

Autonomous image-guided control of endoscopic orientation for OCT scanning

11th Conference on New Technologies for Computer and Robot Assisted Surgery (CRAS), 2022 (Accepted)

A22.

Yao Zhang, Mouloud Ourak, Eric Verschooten, Kenan Niu, Di Wu, Gianni Borghesan, Philip X. Joris, Emmanuel Vander Poorten

Controlling of a Micropositioning Piezoelectric Actuator using an LSTM Network for Robotic Eye Surgery

11th Conference on New Technologies for Computer and Robot Assisted Surgery (CRAS), 2022 (Accepted)

A21.

Sanat Ramesh, Diego Dall'Alba, Paolo Fiorini and Nicolas Padoy

Spatio-temporal models for online activity recognition in cataract surgical videos

11th Conference on New Technologies for Computer and Robot Assisted Surgery (CRAS), 2022 (Accepted)

A20.

Zhen Li, Maria Elisabetta Mancini, Giovanni Monizzi, Daniele Andreini, Giancarlo Ferrigno, Jenny Dankelman, Elena De Momi

Image registration via deep learning towards image-guided interventions

Proc. of the 9th Dutch Bio-Medical Engineering Conference (BME), 2022

A19.

Zhen Li, Enrico Manzionna, Giovanni Monizzi, Angelo Mastrangelo, Maria Elisabetta Mancini, Daniele Andreini, Jenny Dankelman and Elena De Momi

Simulation of Deformable Vasculature for Robot-assisted Endovascular Catheterization

Proc. of the 33rd Conference of the International Society for Medical Innovation and Technology (iSMIT), 2021 (Accepted)

A18.

Guiqiu Liao, Zhongkai Zhang, Oscar Caravaca Mora, Philippe Zanne, Benoit Rosa, Diego Dall’Alba, Paolo Fiorini, Michel de Mathelin, Florent Nageotte, Michalina J. Gora

Colon Lumen exploration with Robotized Optical Coherence Tomography Catheter

Endoscopic Microscopy XVI, SPIE photonics west BiOS 2022(Accepted)

A17.

Guiqiu Liao, Beatriz Farola Barata, Oscar Caravaca Mora, Philippe Zanne, Benoit Rosa, Diego Dall’Alba, Paolo Fiorini, Michel de Mathelin, Florent Nageotte, Michalina J. Gora

Coordinates Encoding Networks: an Image Segmentation Architecture for Side-viewing Catheters

Endoscopic Microscopy XVI, SPIE photonics west BiOS 2022(Accepted)

A16.

Martina Finocchiaro, Xuan Thao Ha, Jorge F. Lazo, Chun-Feng Lai, Sanat Ramesh, Albert Hernansanz, Gianni Borghesan, Diego Dall'Alba, Selene Tognarelli, Benoit Rosa, Alicia Casals, Nicolas Padoy, Paolo Fiorini, Jenny Dankelman, Emmanuel Vander Porten, Arianna Menciassi and Elena De Momi

Multi-level-assistance Robotic Platform for Navigation in the Urinary System: Design and Preliminary Tests

11th Conference on New Technologies for Computer and Robot Assisted Surgery (CRAS), 2022 (Accepted)

A15.

Xuan Thao Ha, Di Wu, Mouloud Ourak, Gianni Borghesan, Arianna Menciassi and Emmanuel Vander Poorten

Compliant Motion Control of Robotic Catheter based on Long-Short Term Memory Network

11th Conference on New Technologies for Computer and Robot Assisted Surgery (CRAS), 2022 (Accepted)

A14.

Mohammad Hasan Dad Ansari, Beatriz Farola Barata, Fabian Trauzettel, Zhen Li, Di Wu, Diego Dall'Alba, Gianni Borghesan, Mouloud Ourak, Veronica Iacovacci, Selene Tognarelli, Jenny Dankelman, Elena de Momi, Paul Breedveld, Paolo Fiorini, Jos Vander Sloten, Arianna Menciassi and Emmanuel Vander Poorten

Proof-of-Concept Medical Robotic Platform for Endovascular Catheterization

11th Conference on New Technologies for Computer and Robot Assisted Surgery (CRAS), 2022 (Accepted)

A13.

Beatriz Farola Barata, Wim-Alexander Beckers, Gianni Borghesan, Diego Dall'Alba, Paolo Fiorini, Jos Vander Sloten and Emmanuel Vander Poorten

Estimation of a Vessel Side-Branches Model for Robotic Intravascular Navigation

11th Conference on New Technologies for Computer and Robot Assisted Surgery (CRAS), 2022 (Accepted)

A12.

Beatriz Farola Barata, Guiqiu Liao, Diego Dall'Alba, Gianni Borghesan, Benoit Rosa, Michel de Mathelin, Florent Nageotte, Paolo Fiorini, Michalina J. Gora, Jos Vander Sloten and Emmanuel Vander Poorten

One-Shot Boundary Detection Network for Multi-Modal Side-Viewing Imaging

11th Conference on New Technologies for Computer and Robot Assisted Surgery (CRAS), 2022 (Accepted)

A11.

Di Wu, Mouloud Ourak, Kenan Niu, Yao Zhang, Awais Mirza Ahmad, Jenny Dankelman, Emmanuel Vander Poorten

Towards Modeling of Hysteresis in Robotic Catheters based on LSTM

32nd Conference of the International Society for Medical Innovation and Technology (iSMIT)

A10.

Guiqiu Liao, Oscar Caravaca Mora, Philippe Zanne, Benoit Rosa, Diego Dall'Alba, Paolo Fiorini, Michel de Mathelin, Florent Nageotte, Michalina Gora

Rotational distortion compensation with deep learning for proximal-scanning endoscopic optical coherence tomography

Proc. SPIE Volume 11620, Endoscopic Microscopy XVI; 1162005 (2021)

A9.

Eleonora Tagliabue, Ameya Pore, Diego Dall'Alba, Marco Piccinelli, Paolo Fiorini

UnityFlexML: Training Reinforcement Learning Agents in a Simulated Surgical Environment

Proc. of the 2nd Italian Conference on Robotics and Intelligent Machines (I-RIM), 2020

A8.

Di Wu, Mouloud Ourak, Mirza Awais Ahmad, kenan Niu, Gianni Borghesan, Jenny Dankelman, Emmanuel Vander Poorten

Feasibility of using a Long Short-Term Memory Network for Robotic Catheter Control